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3D Slicer segmentation recipes

Recipes for common medical image segmentation tasks using 3D Slicer





Thresholding defines intensity range for aorta.

Define standard terminology and color for aorta segment.

Paint seeds inside and outside the aorta using aorta and other segment.

Segmentation preview is shown after clicking Initialize.

Heart ventricles and atria excluded by painting a stroke with the other segment.

Preview segmentation result in 3D.

Segmentation finalized.

Final result.

Final result:

Animation of final result.